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authIdHal_s : antoine-limasset

Compacting de Bruijn graphs from sequencing data quickly and in low memory

Rayan Chikhi , Antoine Limasset , Paul Medvedev
Bioinformatics, 2016, 32 (12), pp.i201 - i208. ⟨10.1093/bioinformatics/btw279⟩
Journal articles hal-01395704v1

BGREAT: A De Bruijn graph read mapping tool

Antoine Limasset , Pierre Peterlongo
JOBIM 2015, Jul 2015, Clermont ferrant, France
Conference poster hal-01192857v1
Image document

Minimal perfect hash functions in large scale bioinformatics Problem

Antoine Limasset , Camille Marchet , Pierre Peterlongo , Lucie Bittner
JOBIM 2016, Jun 2016, Lyon, France
Conference poster hal-01341718v1

On the Representation of De Bruijn Graphs

Rayan Chikhi , Antoine Limasset , Shaun Jackman , Jared T. Simpson , Paul Medvedev
Journal of Computational Biology, 2015, 22 (5), pp.336 - 352. ⟨10.1089/cmb.2014.0160⟩
Journal articles hal-01524525v1
Image document

Nouvelles approches pour l'exploitation des données de séquences génomique haut débit

Antoine Limasset
Bio-informatique [q-bio.QM]. Université de Rennes, 2017. Français. ⟨NNT : 2017REN1S049⟩
Theses tel-01686367v1
Image document

Read mapping on de Bruijn graphs

Antoine Limasset , Bastien Cazaux , Eric Rivals , Pierre Peterlongo
BMC Bioinformatics, 2016, 17 (1), ⟨10.1186/s12859-016-1103-9⟩
Journal articles hal-01349636v1
Image document

A resource-frugal probabilistic dictionary and applications in (meta)genomics

Camille Marchet , Antoine Limasset , Lucie Bittner , Pierre Peterlongo
Prageu Stringology Conference , Aug 2016, Prague, Czech Republic
Conference papers hal-01386744v1